Cytoscape (Open Source)

Cytoscape is an open-source software platform designed for visualizing complex networks and integrating them with various attribute data. Originally developed for biological research, specifically molecular interaction networks and biological pathways, it has evolved into a general platform applicable to fields such as bioinformatics, social network analysis, and the semantic web. Its core functionalities include data integration, analysis, and visualization, which can be extended significantly through a rich ecosystem of community-developed Apps (plugins). The platform supports numerous standard file formats and offers a RESTful API for programmatic access and automation.

See website
See website
Audience members with pink lanyards attentively watching and smiling during a presentation.

Vendor Details

An open-source platform for complex network visualization and analysis across diverse domains.

Claim Profile
Claim Profile
Pillar
Social Media Management & Operations
Primary SITech Category
Data Visualisation
2nd SubCat
3rd SubCat
Tech Category
Open-source software, Java application, JavaScript library (Cytoscape.js), RESTful API, Scripting (Python, R).
Data Coverage
Healthcare & Medical Data
Social Media Data
Alternative / Niche Data
Data Sources
First-Party Data Upload
AI/GenAI Type
Natural Language & Conversational AI
Predictive AI & Analytics
Geographic Coverage
Global / Worldwide
Specialized Industries
Healthcare & Life Sciences
Pharmaceutical
HQ Location
North America

Company Info

alex.pico@gladstone.ucsf.edu

Cytoscape is an open-source software platform designed for visualizing complex networks and integrating them with various attribute data. Originally developed for biological research, specifically molecular interaction networks and biological pathways, it has evolved into a general platform applicable to fields such as bioinformatics, social network analysis, and the semantic web. Its core functionalities include data integration, analysis, and visualization, which can be extended significantly through a rich ecosystem of community-developed Apps (plugins). The platform supports numerous standard file formats and offers a RESTful API for programmatic access and automation.